Data Sets

The following three data sets were used in the paper:

@INPROCEEDINGS{CheKed02,
author="L.P. Chew and K.Kedem",
title="Finding Consensus Shape for a Protein Family",
booktitle="18th ACM Symp. on Computational Geometry. Barcelona, Spain",
year="2002"
}

(reduced)Skolnick data set

@INPROCEEDINGS{CapLan2002,
author="A.Caprara and G.Lancia",
title="Structural Alignment of Large-Size Proteins via Lagrangian Relaxation",
booktitle="Proceedings of RECOMB 2002",
year="2002",
paes="100-108",
publisher="ACM"
}

Leluk-Konieczny-Roterman data set


@article{LelKonRot03,
  author = {J.Leluk and L.Konieczny and I.Roterman},
  year = 2003,
  title = {Search for Structural Similarity in Proteins},
  journal = {Bioinformatics},
  volume = 19,
  number = 1,
  pages = {117-124}
}